Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&ATTGCATGTCGGGTT
(((((((((.((((........&)))).))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001127692
GeneSymbolPCCA
Binding site169,184
Score0.846
Seed1
Au0.632
Energy-14.8
Binding len15
Me-6.149
Phylopstem0.5063414444444444
Phylopflank1.4628129849999996
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end0
PositionCDS
2D Structure