Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCTACCTGGTGTCCGAGTGGACAGTGG
(((((((((....(((((((((&))))))))).....))))...))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001127692
GeneSymbolPCCA
Binding site1224,1251
Score0.846
Seed1
Au0.529
Energy-21.3
Binding len27
Me-12.641
Phylopstem6.007155655555556
Phylopflank4.7624545737499995
Longest consecutive pairings9
Position of longest consecutive pairings18
Pairings in 3prime end8
PositionCDS
2D Structure