Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCCATCCCAGGAACCCAACAGAGCTCAGGACAGCCCACAGGGAGGTGGTGG
(((((.((((((..(((((...&.))))).)))))).))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001127695
GeneSymbolCTSA
Binding site1800,1851
Score1.0
Seed0
Au0.485
Energy-23.2
Binding len20
Me-7.985
Phylopstem4.53545
Phylopflank3.060016125
Longest consecutive pairings6
Position of longest consecutive pairings7
Pairings in 3prime end5
Position3UTR
2D Structure