Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTGCCCAGGCTGGAGTACAATGA
((.(((((((..(((((((((.&)))))))))..))))).)).)).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001127697
GeneSymbolATXN3
Binding site5484,5507
Score1.0
Seed0
Au0.426
Energy-24.8
Binding len23
Me-11.667
Phylopstem0.5174454444444445
Phylopflank0.9613431024999995
Longest consecutive pairings9
Position of longest consecutive pairings14
Pairings in 3prime end7
Position3UTR
2D Structure