Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCTGCCCTAGAGAGAATGACCCAGTGC
((((((.(((((((((((((((&))))))).))))))...)).)))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001127698
GeneSymbolSPINK5
Binding site2940,2967
Score1.0
Seed0
Au0.544
Energy-27.0
Binding len27
Me-5.481
Phylopstem1.1548263989473686
Phylopflank0.8330710042500001
Longest consecutive pairings7
Position of longest consecutive pairings20
Pairings in 3prime end8
PositionCDS
2D Structure