Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TGCATGGAAACAAGTGTGCCATGTGTGCCAGTGTG
((((((((((((..(((.((((&.)))).)))..)))))))))).)).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001127699
GeneSymbolSPINK5
Binding site1635,1670
Score1.0
Seed1
Au0.618
Energy-22.3
Binding len25
Me-6.084
Phylopstem1.9345811846153846
Phylopflank1.1159328025
Longest consecutive pairings10
Position of longest consecutive pairings4
Pairings in 3prime end7
PositionCDS
2D Structure