Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GATCTGCCGTGTGACCAGGG
.((((((((((...(((((((.&))))))).))))).))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001127714
GeneSymbolHIVEP3
Binding site11841,11861
Score0.846
Seed1
Au0.397
Energy-22.3
Binding len20
Me-9.286
Phylopstem2.257976818181818
Phylopflank1.7068945649999998
Longest consecutive pairings7
Position of longest consecutive pairings13
Pairings in 3prime end7
Position3UTR
2D Structure