Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTGCCTCCCAGAGAGGGGAGCCGGCGA
(.(((((((((((((((((((.&)))))).....))))))))))))).).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001127714
GeneSymbolHIVEP3
Binding site6388,6415
Score0.885
Seed1
Au0.426
Energy-30.2
Binding len27
Me-5.101
Phylopstem4.758430333333333
Phylopflank4.597747934999999
Longest consecutive pairings13
Position of longest consecutive pairings3
Pairings in 3prime end7
PositionCDS
2D Structure