Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCTGCCAGCAGAAAGGCCAGTGT
(((((((..(((((((((((((&))))))..)))))))))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001127714
GeneSymbolHIVEP3
Binding site8947,8970
Score1.0
Seed1
Au0.368
Energy-27.4
Binding len23
Me-7.308
Phylopstem0.9412385333333333
Phylopflank2.9009173750000006
Longest consecutive pairings14
Position of longest consecutive pairings1
Pairings in 3prime end8
Position3UTR
2D Structure