Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&GCCAAGGCAGGAGGGAGCTAGA
..(((((((((((((((((...&)))....)))))))))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001127714
GeneSymbolHIVEP3
Binding site5698,5720
Score1.0
Seed1
Au0.426
Energy-25.5
Binding len22
Me-4.957
Phylopstem4.111955257142858
Phylopflank2.3431053350000006
Longest consecutive pairings14
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure