Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGACCCTGCAGCCTTCCCACC&GGTGGGGAGGGTTAAGACCCTTCTGTGAGTTCCCTGTGCGGGGCTG
((.(((((((.((((((((((&)))))))))).).........................)))))))).
Details
MiRNAhsa-miR-4725-5p
RefseqIDNM_001127714
GeneSymbolHIVEP3
Binding site10169,10215
Score0.846
Seed0
Au0.456
Energy-28.7
Binding len46
Me-8.32
Phylopstem3.7784197000000006
Phylopflank4.7538025787499985
Longest consecutive pairings10
Position of longest consecutive pairings36
Pairings in 3prime end8
Position3UTR
2D Structure