Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&GCCCAGAGGACGGGGGGCCCAGCGG
(.(((((((((((((((((...&))))))))....))))))).)).).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001127895
GeneSymbolCHST8
Binding site2075,2100
Score0.923
Seed1
Au0.338
Energy-25.6
Binding len25
Me-5.101
Phylopstem0.1792174909090909
Phylopflank0.6508928199999999
Longest consecutive pairings8
Position of longest consecutive pairings17
Pairings in 3prime end5
Position3UTR
2D Structure