Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&CAGCAGGTGCCAGGA
.((((((((....((.......&))....)))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001127896
GeneSymbolCHST8
Binding site547,562
Score0.846
Seed1
Au0.382
Energy-15.5
Binding len15
Me-12.73
Phylopstem2.5902181
Phylopflank2.057757983125
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end1
PositionCDS
2D Structure