Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GTGCCAGGG
.((((((((.............&)))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001127897
GeneSymbolRPGRIP1L
Binding site4660,4669
Score0.846
Seed1
Au0.588
Energy-15.4
Binding len9
Me-14.322
Phylopstem1.5267041250000002
Phylopflank1.0686998527499998
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end0
Position3UTR
2D Structure