Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GATGTACATTGTGGGACCAGT
..(((((.(((((((((.(((.&))).))))))))).).)))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001127897
GeneSymbolRPGRIP1L
Binding site5299,5320
Score1.0
Seed0
Au0.662
Energy-18.4
Binding len21
Me-7.271
Phylopstem1.6184501111111116
Phylopflank2.18425231375
Longest consecutive pairings9
Position of longest consecutive pairings8
Pairings in 3prime end6
Position3UTR
2D Structure