Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&ATCCGAGGAGGAGCTGGA
..(((((((((((.(((((...&))))).))))))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001128076
GeneSymbolSPDYE4
Binding site343,361
Score1.0
Seed1
Au0.368
Energy-21.9
Binding len18
Me-5.814
Phylopstem0.2216936636363636
Phylopflank0.024623258350000028
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure