Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCTGCCGGGAGCAGCCAAGCAGCACAGTGC
((((((((.((((((.((((((&)))))).)))......))).))).))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001128160
GeneSymbolUBP1
Binding site1749,1779
Score0.846
Seed1
Au0.397
Energy-22.9
Binding len30
Me-5.227
Phylopstem-0.02858755222222224
Phylopflank1.189191355125
Longest consecutive pairings6
Position of longest consecutive pairings24
Pairings in 3prime end7
PositionCDS
2D Structure