Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TACCTTGGTGAGAGGATCAGTGT
((((((.(((((((.(((((..&)))))....))))))))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001128161
GeneSymbolUBP1
Binding site2404,2427
Score0.846
Seed0
Au0.603
Energy-20.9
Binding len23
Me-6.217
Phylopstem3.6774331428571427
Phylopflank5.016709240000001
Longest consecutive pairings13
Position of longest consecutive pairings1
Pairings in 3prime end5
Position3UTR
2D Structure