Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&AGATTTGCATTGAAGGCCGGT
..(((((...((((((((((((&))))))))))))...))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001128164
GeneSymbolATXN1
Binding site3302,3323
Score0.923
Seed0
Au0.515
Energy-20.0
Binding len21
Me-9.57
Phylopstem0.20898609
Phylopflank0.5611861709999999
Longest consecutive pairings12
Position of longest consecutive pairings9
Pairings in 3prime end8
PositionCDS
2D Structure