Details of Duplex


2D Structure dot-bracket from RNAduplex"
CATTATTACTTTTGGTACGCG&GTGTACCAAAAA
.........(((((((((((.&))))))))))).
Details
MiRNAhsa-miR-126-5p
RefseqIDNM_001128164
GeneSymbolATXN1
Binding site5587,5599
Score0.846
Seed0
Au0.706
Energy-15.8
Binding len12
Me-20.48
Phylopstem4.954760909090909
Phylopflank2.8797633124999997
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end7
Position3UTR
2D Structure