Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TCTACACTGGAGCCAGGC
.((((((...((.((((((...&)))))).))..)))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001128215
GeneSymbolLIPM
Binding site1081,1099
Score0.923
Seed1
Au0.529
Energy-20.2
Binding len18
Me-9.695
Phylopstem2.0499533333333333
Phylopflank2.1489729274999996
Longest consecutive pairings6
Position of longest consecutive pairings12
Pairings in 3prime end5
PositionCDS
2D Structure