Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTGCTGGGCCTGAAGCTGCAGG
((((((((..((((...((((&))))....))))...)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001346549
GeneSymbolCRAT
Binding site1719,1743
Score0.846
Seed1
Au0.368
Energy-21.1
Binding len24
Me-7.205
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure