Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TTTACTTGGCTTATTCAATTTCTAAAGCACTTACGTTGTGCCAGGTT
(((((((..(((((((((....&.)))))))))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001128226
GeneSymbolDIS3
Binding site3799,3846
Score1.0
Seed1
Au0.618
Energy-21.2
Binding len18
Me-7.308
Phylopstem-0.1363650833333333
Phylopflank-0.003016009375000017
Longest consecutive pairings16
Position of longest consecutive pairings1
Pairings in 3prime end4
Position3UTR
2D Structure