Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTTATCAACATTACCATCTGATTCTTATTACAGCCAAAGTATAGAAGCAGCTGA
...(((((((((((((((...&.))))))))...........))))))).
Details
MiRNAhsa-miR-5047
RefseqIDXM_047418192
GeneSymbolC1orf185
Binding site369,424
Score0.923
Seed0
Au0.632
Energy-20.6
Binding len28
Me-6.515
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings8
Position of longest consecutive pairings19
Pairings in 3prime end5
PositionCDS
2D Structure