Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCTGCCAGGATCCAGTGA
((((((.((((.....((((((&)))))))))).)))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001128310
GeneSymbolSPARCL1
Binding site1808,1826
Score0.923
Seed0
Au0.515
Energy-21.7
Binding len18
Me-11.943
Phylopstem0.4217454
Phylopflank0.36124249375000006
Longest consecutive pairings10
Position of longest consecutive pairings8
Pairings in 3prime end6
PositionCDS
2D Structure