Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&GCCTAGGAGGGCTCGTCAA
...((((.(((((((((((...&)))))))))))...)))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001128600
GeneSymbolLCE6A
Binding site335,354
Score1.0
Seed0
Au0.426
Energy-20.2
Binding len19
Me-8.828
Phylopstem-0.22186543636363637
Phylopflank0.2029241162499999
Longest consecutive pairings11
Position of longest consecutive pairings8
Pairings in 3prime end5
PositionCDS
2D Structure