Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCTCCCAGGCTGGAGTGCAGTGG
((((((((((..((((((.(((&)))))))))..))))).))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001128610
GeneSymbolUSP8
Binding site15397,15420
Score0.923
Seed1
Au0.368
Energy-27.1
Binding len23
Me-10.109
Phylopstem0.18609245454545453
Phylopflank-0.10852944999999997
Longest consecutive pairings9
Position of longest consecutive pairings14
Pairings in 3prime end7
Position3UTR
2D Structure