Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGACCCTGCAGCCTTCCCACC&TGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGGTCG
.((((((((((((.(((((..&))))))))))......................))))))).
Details
MiRNAhsa-miR-4725-5p
RefseqIDNM_001128610
GeneSymbolUSP8
Binding site13609,13649
Score0.897
Seed1
Au0.338
Energy-26.5
Binding len40
Me-4.65
Phylopstem-0.11528429411764705
Phylopflank-0.07654448749999997
Longest consecutive pairings10
Position of longest consecutive pairings30
Pairings in 3prime end5
Position3UTR
2D Structure