Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TCTGACGAAAGTAGACTGGAGGGTAGCATTGTATGCCT
....((((((((((((......&.)))))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001128626
GeneSymbolSPIRE1
Binding site3640,3678
Score0.923
Seed0
Au0.544
Energy-19.7
Binding len14
Me-9.547
Phylopstem4.6741656250000005
Phylopflank5.2329594125
Longest consecutive pairings12
Position of longest consecutive pairings1
Pairings in 3prime end2
Position3UTR
2D Structure