Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTGCCCTTCAGAGAGGACGATCAGTGA
(((((((((((((((((((((.&))))))...)))))))).).)))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001128626
GeneSymbolSPIRE1
Binding site2478,2505
Score1.0
Seed1
Au0.426
Energy-27.8
Binding len27
Me-3.938
Phylopstem0.3953313269230768
Phylopflank0.31614733249999993
Longest consecutive pairings8
Position of longest consecutive pairings10
Pairings in 3prime end7
PositionCDS
2D Structure