Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTACCCAGAAGGGCACAAGG
..((....(((((((((((((.&)))))))))))))....)).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001128627
GeneSymbolSPIRE1
Binding site3742,3762
Score0.846
Seed0
Au0.618
Energy-24.4
Binding len20
Me-14.834
Phylopstem4.8931415384615375
Phylopflank4.60765583875
Longest consecutive pairings13
Position of longest consecutive pairings7
Pairings in 3prime end7
Position3UTR
2D Structure