Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCTGCCAACCTCAAGGCTGCAGAGGAGGAGCTGGTC
.(((((((((((((((((((((&)))))).............))))).)))))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001128633
GeneSymbolRIMBP3C
Binding site4889,4925
Score0.923
Seed1
Au0.471
Energy-25.7
Binding len36
Me-3.793
Phylopstem1.7738404028571428
Phylopflank1.7077009712499995
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end8
PositionCDS
2D Structure