Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&GCCTGGAAAATGGGCCAGG
..(((((((.(((((((((...&)))))))))..))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001128827
GeneSymbolDLG4
Binding site3560,3579
Score0.846
Seed1
Au0.441
Energy-23.1
Binding len19
Me-6.2
Phylopstem3.575102222222222
Phylopflank3.19819913175
Longest consecutive pairings9
Position of longest consecutive pairings10
Pairings in 3prime end5
Position3UTR
2D Structure