Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCCAGAGGCCAACATCAAGCTCATTCTTTGGAGCGGGTGT
((((.(((((((((((((....&)))))))).....................))))).)))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001128834
GeneSymbolPLP1
Binding site660,700
Score0.846
Seed0
Au0.515
Energy-21.9
Binding len40
Me-8.057
Phylopstem3.9050967647058825
Phylopflank5.121439162499999
Longest consecutive pairings8
Position of longest consecutive pairings32
Pairings in 3prime end4
PositionCDS
2D Structure