Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TGTGCCAGGG
.(((((((((............&))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001128840
GeneSymbolCACNA1D
Binding site9027,9037
Score1.0
Seed1
Au0.471
Energy-16.2
Binding len10
Me-13.079
Phylopstem0.28130676666666665
Phylopflank-0.1991732775
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end0
Position3UTR
2D Structure