Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCTGACAGCTAAGATCCTGATCAAATTGGAGGAGCCAGTT
.(((((((((((((.((((...&.)))).))........))))))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001128843
GeneSymbolTNIP3
Binding site1349,1389
Score1.0
Seed1
Au0.618
Energy-23.4
Binding len28
Me-4.529
Phylopstem1.5896333904761901
Phylopflank1.1647262762500001
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end4
Position3UTR
2D Structure