Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTGCCCTCGCGAAAGGAGCTG
....((((((((((.((((((.&))))))....)))))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001128847
GeneSymbolSMARCA4
Binding site4538,4559
Score1.0
Seed0
Au0.382
Energy-25.3
Binding len21
Me-10.282
Phylopstem4.8848191
Phylopflank5.199801875
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure