Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTGCCACAGAGGGGAGACCT
....(((((((((((((((((.&))))).)))))))))).)).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001128916
GeneSymbolTOMM40
Binding site1214,1234
Score0.846
Seed0
Au0.279
Energy-27.1
Binding len20
Me-9.547
Phylopstem0.41620406894736833
Phylopflank1.829132735624999
Longest consecutive pairings10
Position of longest consecutive pairings4
Pairings in 3prime end7
Position3UTR
2D Structure