Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTGGGGTCCCGGGAGGGATTCCGGA
..((((.(((((((((((....&.)))))))))))..)))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001128916
GeneSymbolTOMM40
Binding site1380,1405
Score0.846
Seed0
Au0.338
Energy-22.8
Binding len19
Me-6.501
Phylopstem-0.018469769090909024
Phylopflank0.17620590774999995
Longest consecutive pairings11
Position of longest consecutive pairings7
Pairings in 3prime end4
Position3UTR
2D Structure