Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTGCCACAGAGGGGAGACCT
....(((((((((((((((((.&))))).)))))))))).)).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001128917
GeneSymbolTOMM40
Binding site1306,1326
Score0.923
Seed0
Au0.279
Energy-27.1
Binding len20
Me-9.547
Phylopstem0.5106184899999999
Phylopflank0.4356769048750001
Longest consecutive pairings10
Position of longest consecutive pairings4
Pairings in 3prime end7
Position3UTR
2D Structure