Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GAAGGTCCGGCGGCTCCGTCTCCGGGCTCTGCCCCTGTGCCAGGG
.(((((((((....(((((...&.)))))...))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001128931
GeneSymbolNAF1
Binding site235,280
Score0.846
Seed1
Au0.279
Energy-21.1
Binding len19
Me-12.111
Phylopstem0.019089222222222216
Phylopflank-0.040734512499999986
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure