Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TCTGCATTGGTAGTGTAAAGCATACCTTGTTAGGA
.(((((((..(((((((((...&)))))))))..................))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001128933
GeneSymbolSYNPO2
Binding site6871,6906
Score0.846
Seed1
Au0.618
Energy-17.4
Binding len35
Me-6.092
Phylopstem0.31455555555555553
Phylopflank0.026362500000000025
Longest consecutive pairings9
Position of longest consecutive pairings26
Pairings in 3prime end5
Position3UTR
2D Structure