Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCTACCCACTCACCTGGAATGGCAGCCTGTGC
(((.((((((.(((((((((((&))))))))........))).)).)))).))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001129
GeneSymbolAEBP1
Binding site1885,1917
Score0.846
Seed0
Au0.382
Energy-24.4
Binding len32
Me-9.794
Phylopstem3.794914289473684
Phylopflank3.2069042
Longest consecutive pairings8
Position of longest consecutive pairings24
Pairings in 3prime end8
PositionCDS
2D Structure