Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCCGGCGTCCTCGCCAGGCCCGGGGAGTGGGCACGGTGG
(((((((((((((((((((...&.)))))))))).)))).))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001129728
GeneSymbolPLEKHG4
Binding site41,80
Score0.846
Seed1
Au0.25
Energy-29.6
Binding len23
Me-3.938
Phylopstem-0.7735771809523809
Phylopflank-0.47329330875
Longest consecutive pairings10
Position of longest consecutive pairings12
Pairings in 3prime end5
Position5UTR
2D Structure