Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TCTGACAGCAGCTGTGTGTCAGGG
.(((((((((((.(((......&.)))..))))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001129729
GeneSymbolPLEKHG4
Binding site3774,3798
Score0.846
Seed1
Au0.353
Energy-20.3
Binding len18
Me-5.082
Phylopstem2.4539287272727273
Phylopflank1.4442432135
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end2
PositionCDS
2D Structure