Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TCAGACAGTGTAGCCAGGA
.((((((.((((.(((.((...&))..))).)))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001129742
GeneSymbolCALHM3
Binding site1468,1487
Score0.846
Seed1
Au0.559
Energy-18.1
Binding len19
Me-7.396
Phylopstem-0.48470073333333324
Phylopflank0.4482337449999999
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end4
Position3UTR
2D Structure