Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&ACACCAGGAAGGTGGCCAGA
..(((((((((((((((((...&)).))))))))).)))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001129742
GeneSymbolCALHM3
Binding site140,160
Score0.885
Seed1
Au0.309
Energy-26.2
Binding len20
Me-4.957
Phylopstem-0.14553326842105263
Phylopflank-0.04005526749999998
Longest consecutive pairings9
Position of longest consecutive pairings8
Pairings in 3prime end5
Position5UTR
2D Structure