Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&ACCCGGAAGGGAAAAGGGACCCATCAAGGAAGTTCCAGG
..((((.((((((((((((...&))))))))))))......................)))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001129828
GeneSymbolCSAG3
Binding site428,467
Score0.923
Seed0
Au0.456
Energy-22.1
Binding len39
Me-6.501
Phylopstem-0.36849686666666664
Phylopflank-0.15199887
Longest consecutive pairings12
Position of longest consecutive pairings27
Pairings in 3prime end5
PositionCDS
2D Structure