Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&ATCATACATGGTGTGTCAGA
..(((((((((.((((((((..&))).))))).))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001129883
GeneSymbolPATE3
Binding site213,233
Score0.846
Seed1
Au0.588
Energy-19.2
Binding len20
Me-8.304
Phylopstem1.552267777777778
Phylopflank-0.011316906250000008
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure