Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&ACCTAGGGTGGGCTGCCTTTCAGGATCCGTCATCAAAGGGAGTCAA
...((((((((((((((((((.&.)))))...)))))............)))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001129883
GeneSymbolPATE3
Binding site1158,1204
Score0.808
Seed0
Au0.515
Energy-20.3
Binding len35
Me-6.515
Phylopstem0.040242106060606075
Phylopflank-0.29140914400000006
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end7
Position3UTR
2D Structure